Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVV-NDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARR----GQHWVSAVRVGNDITVDDVTVSDSASIAALVMDGLESI----HHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYR-DDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
5DLB Chain:A ((22-301)) | ------PNAVELTVENAWFIAEMVGAGTFPWVLAITTPYSDEAQRSAFFARQRDELTQLGLLSSDGVVNPAVAEWIKVVCFPERWLDLRYVGP----------------------LLRGIVAQSAGIM-FNTVVALRNAQLVTFTAMDIDD-PR--A-L---VPVLGVGLSARPPARFEEFSMPMRVGARADERLRS---GESLDEVLDYLGIPVSARPVVQAVFSGPR-SYVEIVAGCNRDGEHTTTDVGLSIVDTTAGRVLVSP--SRAFDGEWVSTFSAGTPFATAVAIDQLIANLPDGQWF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DLB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149421 for 1922 contacts (-77.7/contact) +
2D Compatibility (PS) -27294 + (NN) -10765 + (LL) 1556
1D Compatibility (HY) -12800 + (ID) 2250
Total energy: -200974.0 ( -104.57 by residue)
QMean score : 0.484
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