Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRPQAAAEDARNAMVAGLLASGISVNGLQPSHNPQVAAQMFTTATRLDPKMCDAWLARLLAGDQSIEVLAGAWAAVRTFGWETRRLGVTDLQFRPEVSDGLFLRLAITSVDSLACAYAAVLAEAKRYQEAAELLDATDPRHPFDAELVSYVRGVLYFRTKRWPDVLAQFPEATQWRHPELKAAGAAMATTALASLGVFEEAFRRAQEAIEGDRVPGAANIALYTQGMCLRHVGREEEAVELLRRVYSRDAKFTPAREALDNPNFRLILTDPETIEARTDPWDPDSAPTRAQTEAARHAEMAAKYLAEGDAELNAMLGMEQAKKEIKLIKSTTKVNLARAKMGLPVPVTSRHTLLLGPPGTGKTSVARAFTKQLCGLTVLRKPLVVETSRTKLLGRYMADAEKNTEEMLEGA---LGGAVFFDEMHTLHEKGYSQGDPYGNAIINTLLLYMENHR----DELVVFGAGYAKAMEKMLEVNQGLRRRFSTVIEFFSYTPQELIALTQ-LMGRENEDVITEEESQV--LLPSYTKFYMEQSYSED--------GDLIRGIDLLG-NAGFVRNVVEKARDHRSFRLDDEDLDAVLASDLTEFSEDQLRRFKELTREDLAEGLRAAVAEKKTK |
| 4L15 Chain:A ((320-581)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLEGAKKALREI---VVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQ-CKATFF------NISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSS-----HESSRRIKTEFLVQLDGVNTAPDERLLVLG-----ATNRPQELDEAARRRFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLERIRELTDGYSGADMRQLCTEAAMGPIRDIGDDIETIDKDDIRAVTVMDFAEAARVVRP-TVDDSQLDAYAAWD---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68055 for 1826 contacts (-37.3/contact) +
2D Compatibility (PS) -25816 + (NN) -6507 + (LL) 29156
1D Compatibility (HY) -11200 + (ID) 3450
Total energy: -85872.0 ( -47.03 by residue)
QMean score : 0.409
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