Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYPLVRRLLFLIPPEHAHKLVFAVLRGVAAVAPVRRLLRRLLGPTDPVLASTVFGVRFPAPLGLAAGFDKDGTALSSWGAMGFGYAEIGTVTAHPQPGNPAPRLFRLADDRALLNRMGFNNHGARALAIRL-ARHRPE-------IPIGVNIGKTKKTPAGDAVNDYRASARMVGPLASYLVVNVSSPNTPGLRDLQAVESLRPILSAVRAETST-------PVLVKIAPDLSDSDLDDIADLAVELDLAGIVATNTTVSR-DGLTTPGVDRLGPGGISGPPLAQRAVQVLRRLYDRVGDRLALISVGGIETADDAWERITAGASLLQGYTGFIYGGERWAKDIHEGIARRLHDGGFGSLHEAVGSARRRQPS
4IGH Chain:A ((17-364))----------LLDPESAHRL--AVRFTSLGLLPR---------QDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSV--DAAEDYAEGVRVLGPLADYLVVNVSSPNTAGL----GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQ--GALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR---


General information:
TITO was launched using:
RESULT:

Template: 4IGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160244 for 2924 contacts (-54.8/contact) +
2D Compatibility (PS) -35484 + (NN) -21898 + (LL) 2624
1D Compatibility (HY) -27600 + (ID) 7550
Total energy: -250152.0 ( -85.55 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4IGH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IGH-query.scw
PDB file : Tito_Scwrl_4IGH.pdb: