Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPPHNYLAVIKVVGIGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMDAFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQGVLMSIAGGSDLGLFEINEAASLVQDAAHPDANIIFGTVIDDSLGDEVRVTVIAAGFDVSGPGRKPVMGETGGAHRIESAKAGKLTSTLFEPVDAVSVPLHTNGATLSIGGDDDDVDVPPFMRR |
4E6E Chain:A ((2-313)) | VAAPQNYLAVIKVVGIGGGGVNAVNRMIEEGLKGVEFIAINTDAQALLMSDADVKLDVGRELTR----GANPDVGRKAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGGAPVVANIARSLGALTIGVVTRPFSFEGKRRATQAEAGIAMLREEVDTLIVIPNDRLL---DRQVSVLDAFKAADQVLLSGVQGITDLITTPGLINLDFADVKSVMSGAGSALMGIGSARGDDRAVAAAEMAISSPLLEASIDGAHGVLLSIQGGSDLGLFEINEAAQLVANSAAAEANIIFGAVIDDALGDEVRVTVIAAGF------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4E6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224835 for 2769 contacts (-81.2/contact) +
2D Compatibility (PS) -34168 + (NN) -21077 + (LL) 2100
1D Compatibility (HY) -39200 + (ID) 12450
Total energy: -329630.0 ( -119.04 by residue)
QMean score : 0.585
|
|
|