Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAM-PDTNVAPAYRSSVSASVSA------SAATSSIRESQRQQSLT---TKAIRTSCDALAATSKD-AIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF
3WPR Chain:A ((3196-3324))
--------------------------------------------------------------------------------------------------------------DGTITGPTYNVAQGNQTNVGDALTALDNAINTAATTSKSTVSNGQNIVVSKSKNADGSDNYEVSTAKDLTVDSVKAGDTVLN---NAGITIGNNAVVLNNTGLTISGGPSVTLAGI--DAGNKTI---QNVANAVNA-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5593 for 514 contacts (10.9/contact) +
2D Compatibility (PS) -11948 + (NN) 903 + (LL) 9172
1D Compatibility (HY) -400 + (ID) 2150
Total energy: 1170.0 ( 2.28 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_3WPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WPR-query.scw
PDB file :
Tito_Scwrl_3WPR.pdb
: