Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLRRWS-VPPVRPPVTVVQALPK-SERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQA---------GSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR |
| 3KW2 Chain:A ((7-242)) | ----LFYA---PDIEQSDRLPDDEAGHILRVLRMQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRDRITIAIAPTKQSERMEWMLEKLVEIGVDEVV------FIESEHSERRRIKAERLERIAISAMKQSLKASFP----VIRVNIPIQTVIADTPKAAVRLIAYVDEAVR------GRGYPSDFYHVGQDVLILIGPEGDFSPSEVESALLAGFAPVSLGESRLRTETAGLVACQWIHTL------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139821 for 1711 contacts (-81.7/contact) +
2D Compatibility (PS) -23620 + (NN) -5991 + (LL) 3364
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -178668.0 ( -104.42 by residue)
QMean score : 0.385
|
|
|