Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAEHCRGAGGCDECPSVMPEHPTALFHDVAAIALAQPGAEPGAMMGFPCRPALLPHLSRAVMRCVRTRSASTSLGVSVIAGQLPAAGSRHRLGAPCRHVRWWLASDGHWGMVSYIPTALNVSMGGIVGWRCVP
2Y5C Chain:A ((42-56))
------ACEASLACSTCHVYV-------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Y5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2297 for 43 contacts (-53.4/contact) +
2D Compatibility (PS) -1675 + (NN) -2308 + (LL) 7676
1D Compatibility (HY) -2000 + (ID) 150
Total energy: -754.0 ( -17.53 by residue)
QMean score : 0.884
(partial model without unconserved sides chains):
PDB file :
Tito_2Y5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y5C-query.scw
PDB file :
Tito_Scwrl_2Y5C.pdb
: