Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADLLPVLVVGAPLRHRHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYS-VGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEITPELI---PTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG |
| 4F4H Chain:A ((282-555)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVYRALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAE-----RVRAVMMPSRYTAGISTTDAADMARRVGVRYDEIAIAPMFDAFRASLAAEFAGLAE---DATEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTL-YGDMAGGFAVIKDIAKTLVYRLCRYRNAAAEYGQP-----------DIVPERILTR-------------LPPYDVLD-AIMRMYMEEDRPLAEIVAAGYSEADVKR---------------------------VTRLIKINEYKRRQAPVGIRVTHRAFGR---DWRYP------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117798 for 1865 contacts (-63.2/contact) +
2D Compatibility (PS) -27274 + (NN) -10301 + (LL) 26952
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -148921.0 ( -79.85 by residue)
QMean score : 0.424
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