Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARSDAGGQSVKSRTSNRSRSSRRSRVRSSISALVDNPQARPRELPVLCGWPVVRVEPVCEFVPEPVCGQAEVLGEPAAAHRVTSARRSPSTTVCSRSQKASAVVISSVSSVARVRRASVSSVDATTA
4GWM Chain:A ((243-281))
------------------------------------------------------------CSFELENVCGMIQSSGDNADWQRVSQVPRGPES------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3039 for 111 contacts (-27.4/contact) +
2D Compatibility (PS) -3544 + (NN) -2688 + (LL) 6236
1D Compatibility (HY) -800 + (ID) 600
Total energy: -4435.0 ( -39.95 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_4GWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GWM-query.scw
PDB file :
Tito_Scwrl_4GWM.pdb
: