Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
2PY4 Chain:A ((22-174))
-STTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
General information:
TITO was launched using:
RESULT:
Template:
2PY4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82386 for 977 contacts (-84.3/contact) +
2D Compatibility (PS) -16914 + (NN) -7867 + (LL) 208
1D Compatibility (HY) -19600 + (ID) 7650
Total energy: -134209.0 ( -137.37 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_2PY4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PY4-query.scw
PDB file :
Tito_Scwrl_2PY4.pdb
: