Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLAVVKRSGVTEPFSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSADDFAREIEALRAHRNLSAHS |
| 5FKV Chain:A ((1076-1135)) | ----------------------------------------------------------AREKYARGLAISLTDRQIDDQLLNRLRQSLEPHR----SGTIPVHLY-------YQRADARARLRFGATWR------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1374 for 313 contacts (4.4/contact) +
2D Compatibility (PS) -6248 + (NN) -1492 + (LL) 5828
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -4088.0 ( -13.06 by residue)
QMean score : 0.163
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