Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISDN-----RRRASLAKILAGFGYRVQESAFEAMLTKGQLAKLVARIDRFAID--CDNIRIYKIRGVAAVTFYGRGRLVSAEEFVFF
4QR2 Chain:A ((1-69))
-------------------------MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQI-IDEKTDSIRFY-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60635 for 403 contacts (-150.5/contact) +
2D Compatibility (PS) -6791 + (NN) -3540 + (LL) 3484
1D Compatibility (HY) -6800 + (ID) 1200
Total energy: -75482.0 ( -187.30 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_4QR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QR2-query.scw
PDB file :
Tito_Scwrl_4QR2.pdb
: