Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANVQYSAVTQRYPGADAPTV-DNLDLDIADGEFLVLVGPSGCGKSTTLRVLAGLEPIESGRISIGDVDVTHLPPRARDVAMVFQNYALYPNMTVAANMGFALRNAGMSRADTRRRVLEVADMLELTDLLDRKPAKLSGGQRQRVAMGRAIVRRPRVFCMDEPLSNLDAKLRVSTRSQISGLQRRLGTTTVYVTHDQVEAMTMGDRVAVLKDGVLQQVDTPRALYDDPVNTFVATFIGAPAMNLIDAAVA-----HGVVRAPDLAIPVPDPA-----AERVLVGVRPESWDVASIGTPGS----LTVHVELVEELGFESFVYATPVDQRGWSSRAPRIVFRTDRRTAVRVGESLAIVPHSQEVRLFNSRTETRLR |
| 4XIG Chain:S ((2-362)) | VASVSIQNVVKRY---DKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVDSTQHVELNGGNRISLLPRAGTHLAPGQEVVFGIRPE--DVTLDGVEGSERAQIKATVDIVEPLGSESILHATVGDH--------SLVVKVGGLNEVHPGDPVTLHVDLTRVHLFDAQSQASI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203300 for 2739 contacts (-74.2/contact) +
2D Compatibility (PS) -37894 + (NN) -15779 + (LL) 192
1D Compatibility (HY) -34800 + (ID) 8450
Total energy: -300031.0 ( -109.54 by residue)
QMean score : 0.428
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