Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEALIGLAFAAGLVAALNPCGFAMLPAYLLLVVYGQDSAGRTGPLSAVGRAAAATVGMALGFLTVFGIFGALTISAATAVQRYLPYATVLIGLALIALGGWLLLGRGLTALTPRSLGVRWAPTVRLGSMYGYGISYAVASLSCTIGPFLAVTGAGLRGGSVVGSVAIYLAYVAGLTLVVGVLAVAAATASSALADRLRRILPFVNRISGALLVVVGLYVGYYGLYELRLIAGVGANPQDAVIAAAGRLQGALAGWVNQHGAWPWAVLLVVLVVGAFAGTWFRRVRR |
| 2BMY Chain:A ((29-86)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKIFSGDVVDGVDVTFTYYGKTETRHYGGSGGTPHEIVLQEGEYLVGMAGEVANYHGA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20827 for 276 contacts (-75.5/contact) +
2D Compatibility (PS) -5845 + (NN) 2264 + (LL) 18488
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -8470.0 ( -30.69 by residue)
QMean score : -0.193
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