Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
4KAW Chain:X ((2-184))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSGITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLE-
General information:
TITO was launched using:
RESULT:
Template:
4KAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56542 for 1333 contacts (-42.4/contact) +
2D Compatibility (PS) -20381 + (NN) -13382 + (LL) 400
1D Compatibility (HY) -20000 + (ID) 9100
Total energy: -119005.0 ( -89.28 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4KAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KAW-query.scw
PDB file :
Tito_Scwrl_4KAW.pdb
: