Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKGSMTAHATPNEPDYPPPPGGPPPPADIGRLLLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEGGTFLQRAIFHLPGLTAAVDELQRDFGSTVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDLAA--HVRPFGVPFIHIPATR-DTRTEAEQRQ-LQLLSGNVDLVVLARYMQILSPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQDVVRV---DHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHHNQTIVF |
| 2YWR Chain:A ((3-199)) | --------------------------------------------------------------------------------------------------------------------KIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDESVDAGPVIVQAVVPVLPEDDENTLADRI---LKWEHKILPQTVQWFAQDRIIIDGRKVIV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162530 for 1537 contacts (-105.7/contact) +
2D Compatibility (PS) -20700 + (NN) -11178 + (LL) 4932
1D Compatibility (HY) -16400 + (ID) 3350
Total energy: -209226.0 ( -136.13 by residue)
QMean score : 0.458
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