Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLNTERT
3RBA Chain:A ((1-157))
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN----
General information:
TITO was launched using:
RESULT:
Template:
3RBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118145 for 1216 contacts (-97.2/contact) +
2D Compatibility (PS) -17312 + (NN) -9257 + (LL) 308
1D Compatibility (HY) -23600 + (ID) 7850
Total energy: -175856.0 ( -144.62 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3RBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RBA-query.scw
PDB file :
Tito_Scwrl_3RBA.pdb
: