Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVAAYAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQP--NYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNS--IGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGANTR---VAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGLRLGAKSYYATADPDT-FRKLRGGFDLILNTVSA--NLDLGQYLNLLDVDGTLVELGIP--EHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIEL--IEPDYINDAYERVLASDVRYRFVIDISAL |
4OAQ Chain:A ((27-359)) | -------------------SYERKQINPHDVVLKNEVCGLCYSDIHTLSAGW-QPLQRDNLVVGHEIIGEVIAVGDEVTEFKVGDRVGIGAASSSCRSCQRCDSDNEQYCKQGAA-TYNSKDVRSNNYVTQGGYSSHSIADEKFVFAIPEDLPSSYGAPLMCAGITVFSPLIR-NLGLDARGKNVGIIGIGGLGHLALQFANAMGANVTAFSRSSSKKEQAMKLGAHDFVATGEDKTWYKNYDDHFDFILNCASGIDGLNLSEYLSTLKVDKKFVSVGLPPSEDKFEVSPFTFLQQGASFGSSLLGSKTEVKEMLNLAAKHNVRPMIEEVPISEENCAKALDRCHAGDVRYRFVF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202030 for 2797 contacts (-72.2/contact) +
2D Compatibility (PS) -34420 + (NN) -14207 + (LL) 2312
1D Compatibility (HY) -27200 + (ID) 7350
Total energy: -282895.0 ( -101.14 by residue)
QMean score : 0.477
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