Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIAGRSLVYFSSVSENTHRFVQKLGIPATRIPLHGRIEVDEPYVLILPTYGGGRANPGLDAGGYVPKQVIAFLNNDHNRAQLRGVIAAGNTNFGAEFCYAGDVVSRKCSVPYLYRFELMGTEDDVAAVRTGLAEFWKEQTCHQPSLQSL
4BMP Chain:B ((2-112))
-------LVAYDSMTGNVKRFIHKLNMPAVQID--EDLVIDEDFILITYTTGFGN----------VPERVLDFL--ERNNEKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDV--------EYFKER----------
General information:
TITO was launched using:
RESULT:
Template:
4BMP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95937 for 871 contacts (-110.1/contact) +
2D Compatibility (PS) -11593 + (NN) -2656 + (LL) 1512
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -121074.0 ( -139.01 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4BMP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMP-query.scw
PDB file :
Tito_Scwrl_4BMP.pdb
: