Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGAR---PGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
2JN6 Chain:A ((2-89))
----PTKTYSEEFKRDAVALYENSD------GASLQQIANDLGI-NRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESC------------
General information:
TITO was launched using:
RESULT:
Template:
2JN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9139 for 468 contacts (-19.5/contact) +
2D Compatibility (PS) -9212 + (NN) -6208 + (LL) 760
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -26999.0 ( -57.69 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2JN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN6-query.scw
PDB file :
Tito_Scwrl_2JN6.pdb
: