Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPIQAPDGGQGWPAAALGPAQRAVAWKRLGTEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPLPFLFPLTKRWWERPY------IAAGIFLYDRLGGAKSVPAQRHFTRAGALRLSPGLKRSSLIGGIRYYDTVVDDARHTMTVARTAAHYGAVVRCSTQVVALLREGDRVIGVGVRDSENGAVAEVRGHVVVNATGVWT----DEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAMILRTEKSVMFVIPWGSHW-IIGTTDTDWNLDLAHPAATKADIDYILGTVNAVLATPLTHADIDGVYAGLRPLLAGESDDTSKLSREHAVAVP----AAGLVAIAGGKYTTYRVMAADAIDAAVQFIPARVAPSITEKVSLLGA--DGYFALVNQAEHVGALQGLHPYRV----RHLLDRYGSLISDVLAMAASDPSLLSPITEAPG--YLKVEAAYAAAAEGALHLEDILARRMRISIEYPHRGVDCAREVAEVVAPVLGWTAADIDREVANYMARVEAEVLSQAQPDDVSADMLRASAPEARAEILEPVPLD |
| 2R4J Chain:A ((27-472)) | ----------------------------------------------------------LSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREV-LLKMAPHIAFPMRFRLP------HRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKR-----GFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWI-VEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYG---IRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQG-IGPAWTKESVLPGGAIEG-----DRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGT----VSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTK------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193220 for 3336 contacts (-57.9/contact) +
2D Compatibility (PS) -45131 + (NN) -9278 + (LL) 10656
1D Compatibility (HY) -22800 + (ID) 7600
Total energy: -267373.0 ( -80.15 by residue)
QMean score : 0.330
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