Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDDQPAVPDVDRLARSMLLLHGDHHDHNDSPEQHRTCGSWSKSRDFADDPQRAAAVREASRAERDRYLTSGLQPVDCRFCHVTVTVKRLGPGHTAVQWNTEASRRCAYFTELRARGGDSARTRSCPRLTDSIEHAVAEGYLEHHDPNR |
1YX4 Chain:A ((17-41)) | -----------------------------------------------SADPELALALRVSMEEQRQRQEEEA----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6859 for 97 contacts (70.7/contact) +
2D Compatibility (PS) -3023 + (NN) -3035 + (LL) 5968
1D Compatibility (HY) 400 + (ID) 350
Total energy: 6819.0 ( 70.30 by residue)
QMean score : 0.690
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