Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPA-ARTRMT----ETVFAEMMAK-PQEGFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
| 2UVD Chain:A ((1-245)) | --MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVN---------YAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTK-AVSRFMMRQRHG--------RIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFG--EAQDIANAVTFFASDQSKYITGQTLNVDGGMV------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100341 for 2119 contacts (-47.4/contact) +
2D Compatibility (PS) -26224 + (NN) -11187 + (LL) 2412
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -157040.0 ( -74.11 by residue)
QMean score : 0.529
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