Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYG--HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRD--SMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGRQVDDRDWIARESTAVSLWGHDFTVGARG |
| 1LKD Chain:A ((1-284)) | -SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLF-RIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVT------VPAY--FLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDADGL-ITSTLGRHTNDHMVSFYASTPSGVEVEYGWSARTV-DRSWVVVRHDSPSMWGH-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145222 for 2344 contacts (-62.0/contact) +
2D Compatibility (PS) -30704 + (NN) -18297 + (LL) 328
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -221745.0 ( -94.60 by residue)
QMean score : 0.534
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