Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
1OBG Chain:A ((209-285))
--------------GIIIADTKFEFGIDEKTNEIILVDEVLTP--DSSRFWNGASYKVGESQ-------------DSYDKQFLRDWLTANKLNGVNGVKMPQDIVD------
General information:
TITO was launched using:
RESULT:
Template:
1OBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13625 for 374 contacts (36.4/contact) +
2D Compatibility (PS) -8253 + (NN) -2766 + (LL) 1968
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: 574.0 ( 1.53 by residue)
QMean score : 0.122
(partial model without unconserved sides chains):
PDB file :
Tito_1OBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OBG-query.scw
PDB file :
Tito_Scwrl_1OBG.pdb
: