Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGGTWDLFRYPGIRSDSDMYTLGFRF-----RPWTGRQAIADGKPILEYVKSTAAMYGIDRHIRFHHKVISADWSTAENRWTVHIQSHGTLSALTCEFLFLCSGYYNYDEGYSPRFAGSEDFVGPIIHPQHWP-EDLDYDAKNIVVIGSGATAVTLVPALADSGAKHVTMLQRSPTYIVSQPDRDG--------------------------------------------IAEKLNRWLPETMAYTAVRWKNVLRQAAVYSACQKWPRRMRKMFL---SLIQRQLPEGYDVRKHFGPHYNPWDQRLCL-VPNGDLFRAIRHGKVEVVTDTIERFTATGIRLNSGRELPADIIITATGLNLQLFGGATATIDGQQVDITTTM--------AYKGMMLSGIPNMAYTVGYTNASWTLKADLVS-----EFVCRLLNYMDDNGFDTVVVERPGSDVEERPFMEFTPGYVLRSLDELPKQGSRTPWRLNQNYLRDIRLIRRGKIDDEGLRFAKRPAPVGV |
| 2YLZ Chain:A ((15-469)) | --EEVDVLVVGAGFSGLYALYRLRELG--RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHG--DRIRARYLIMASGQLSVPQ--LPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAE-LFVFQRTPHFAV--PARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYP----FG------TKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVR-TSEREYELDSLVLATGFD--ALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPS-ALSNGLVSIEQHVEWVTDHIAYMFKNGL--------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -238228 for 3110 contacts (-76.6/contact) +
2D Compatibility (PS) -40596 + (NN) -5964 + (LL) 5556
1D Compatibility (HY) -28000 + (ID) 6000
Total energy: -313232.0 ( -100.72 by residue)
QMean score : 0.378
|
|
|