Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
3SFI Chain:A ((42-234))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
3SFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105532 for 1397 contacts (-75.5/contact) +
2D Compatibility (PS) -21269 + (NN) -17137 + (LL) 1092
1D Compatibility (HY) -24800 + (ID) 9600
Total energy: -177246.0 ( -126.88 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_3SFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SFI-query.scw
PDB file :
Tito_Scwrl_3SFI.pdb
: