Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDGQNARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAA-------------EILSRGQQKLVVCALRIAQGHLINRAKRGQCVYLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA |
4UX3 Chain:A ((295-494)) | -------------------------------------------------------------------------------------------------------------------------------------------GLKNVNKRAFENFKKFNE--RRKDLAERASELDESKDSIQDLIVKLKQQKVNAVDSTF-QKVSENFEAVFERLVPRGTAKLIIH------------------------------------------SISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAI-QMVDPA----SFYLFDEIDAALDKQYRTAVATLLKELSKNAQFICT-------TFRTDMLQVADKFFRVKYENKISTVIEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57701 for 833 contacts (-69.3/contact) +
2D Compatibility (PS) -16371 + (NN) -5335 + (LL) 13156
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -76251.0 ( -91.54 by residue)
QMean score : 0.405
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