Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYP-----GTIQVVIGPAMHAEGEGPRAIAEL---NQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
3FLC Chain:O ((50-96)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3050 for 131 contacts (-23.3/contact) +
2D Compatibility (PS) -4008 + (NN) -1519 + (LL) 15484
1D Compatibility (HY) -2800 + (ID) 900
Total energy: 3207.0 ( 24.48 by residue)
QMean score : 0.141
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