Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDA---PILQMEVVRVDA----EGVGLRFLSEA
3PH1 Chain:A ((98-164))
------------------------RLALGTVHWSVRGIRLASPH--AHPPGTTGSVLLQ-PSDWLPELLQLPADVLASASDGQQHWLWLRFAPLG
General information:
TITO was launched using:
RESULT:
Template:
3PH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21252 for 330 contacts (-64.4/contact) +
2D Compatibility (PS) -6266 + (NN) 116 + (LL) 1424
1D Compatibility (HY) 0 + (ID) 650
Total energy: -26628.0 ( -80.69 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3PH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH1-query.scw
PDB file :
Tito_Scwrl_3PH1.pdb
: