Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIEGLEKMLAKGVDNALLRFGLGKGYLDAGDAERAAEHLQRCVEQDPKYSAGWKLLGKARQAAGDLAGARQAWEQGLATAATHGDKQAEKEMTVFLRKLDRART
2WQH Chain:A ((29-104))
--IEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYP-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2WQH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7951 for 554 contacts (-14.4/contact) +
2D Compatibility (PS) -8819 + (NN) -8236 + (LL) 2372
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -26634.0 ( -48.08 by residue)
QMean score : 0.708
(partial model without unconserved sides chains):
PDB file :
Tito_2WQH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WQH-query.scw
PDB file :
Tito_Scwrl_2WQH.pdb
: