Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADVDWYAMVYLYNRELKREDFDTTEAHYRQGT---RSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHH---VWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL
1QMD Chain:A ((92-172))-----------------------------------------------------------------------------------------------------------------------------------------------------------------DTGESQIRKFSALARYEWQR--GNYKQATFY---------------------LGEAMHYFGDIDTPYHPANVTAVDSAGHVKFETFAEERKEQYKINTAGCKTNEAFYTDILKNKDFNAWSKEYARGFAKTGKSIYYSHASMSHSWDDWDYAAKVTLANSQKGTAGYIYRFLH


General information:
TITO was launched using:
RESULT:

Template: 1QMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9128 for 358 contacts (25.5/contact) +
2D Compatibility (PS) -8019 + (NN) -1477 + (LL) 11772
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: 8204.0 ( 22.92 by residue)
QMean score : 0.075

(partial model without unconserved sides chains):
PDB file : Tito_1QMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QMD-query.scw
PDB file : Tito_Scwrl_1QMD.pdb: