Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKG-LPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR
1UJP Chain:A ((7-249))-------FAKARSEGRAALIPYLTAGFPSREGFLQAVEEVLPYA--DLLEIGLPYSD----GPVIQRASELALRKGMSVQGALELVREVRA-LTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSV------------EVKDLVRRIKARTALPVAVGFGV-SGKATAAQAAVADGVVVGSALVRALEEGRSLAPLLQEIRQGLQRLPLP-----


General information:
TITO was launched using:
RESULT:

Template: 1UJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169598 for 1912 contacts (-88.7/contact) +
2D Compatibility (PS) -26048 + (NN) -19044 + (LL) 1872
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -238418.0 ( -124.70 by residue)
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_1UJP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UJP-query.scw
PDB file : Tito_Scwrl_1UJP.pdb: