Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKG-LPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR
1UJP Chain:A ((7-249))
-------FAKARSEGRAALIPYLTAGFPSREGFLQAVEEVLPYA--DLLEIGLPYSD----GPVIQRASELALRKGMSVQGALELVREVRA-LTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSV------------EVKDLVRRIKARTALPVAVGFGV-SGKATAAQAAVADGVVVGSALVRALEEGRSLAPLLQEIRQGLQRLPLP-----
General information:
TITO was launched using:
RESULT:
Template:
1UJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169598 for 1912 contacts (-88.7/contact) +
2D Compatibility (PS) -26048 + (NN) -19044 + (LL) 1872
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -238418.0 ( -124.70 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1UJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UJP-query.scw
PDB file :
Tito_Scwrl_1UJP.pdb
: