Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPS-ARLRAIRTLSGNGIPVGVLCSPMIPMVNDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
3NUT Chain:A ((134-234)) | ----------------------------------------------------------------------------------------------------------------------GHDFCAINLSDNLKPFEILEKRLRHAARG-DFAMAFYNPRS-KSRPHQFTRVLEILREECEPGRLILFARAVTTPEQAISVVELRDATPEMADMRTV-VLVGNAATRRVGPWVYTPR---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31610 for 671 contacts (-47.1/contact) +
2D Compatibility (PS) -11155 + (NN) -5672 + (LL) 14656
1D Compatibility (HY) -2400 + (ID) 1350
Total energy: -37531.0 ( -55.93 by residue)
QMean score : 0.289
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