Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVMGSTLVLLAA-RGNQASCLWA--GDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVVRSLVHLGLTRGAPDNITALVVRAF
2JFT Chain:A ((4-231))------SVLSAATATDQGPVRENNQDACL--ADGILYAVADGFG--ARGHHASATALKTLSAGFAAA--PDRDGLLEA-VQQANLRVFELLGDE-PTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG


General information:
TITO was launched using:
RESULT:

Template: 2JFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140056 for 1985 contacts (-70.6/contact) +
2D Compatibility (PS) -23329 + (NN) -3501 + (LL) 88
1D Compatibility (HY) -6000 + (ID) 4150
Total energy: -176948.0 ( -89.14 by residue)
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_2JFT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JFT-query.scw
PDB file : Tito_Scwrl_2JFT.pdb: