Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
1UGI Chain:A ((42-84))
-------------------------------------------------------LVHTAYDESTDENVMLLTSDAPEYKPWALVIQDSNGENKIKML----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10022 for 215 contacts (-46.6/contact) +
2D Compatibility (PS) -4543 + (NN) -595 + (LL) 5704
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -13306.0 ( -61.89 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_1UGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UGI-query.scw
PDB file :
Tito_Scwrl_1UGI.pdb
: