Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQRE---GRDLMLRQVFIERRPA-VLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
1P59 Chain:A ((67-138))
----------------------------------------------------DYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLID-KYNGEVPRDRDELMKLPGVGRKTANVVVSTAFGVPAIAVDTHVERVSKRLGFCRWDDSV
General information:
TITO was launched using:
RESULT:
Template:
1P59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22532 for 393 contacts (-57.3/contact) +
2D Compatibility (PS) -7213 + (NN) -2308 + (LL) 3436
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -34067.0 ( -86.68 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_1P59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P59-query.scw
PDB file :
Tito_Scwrl_1P59.pdb
: