Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
2B7K Chain:A ((31-156))
-------------------------------------------------------------GNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRV------------LVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYV
General information:
TITO was launched using:
RESULT:
Template:
2B7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76989 for 779 contacts (-98.8/contact) +
2D Compatibility (PS) -12348 + (NN) -6936 + (LL) 6036
1D Compatibility (HY) -12400 + (ID) 1800
Total energy: -104437.0 ( -134.07 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2B7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B7K-query.scw
PDB file :
Tito_Scwrl_2B7K.pdb
: