Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYAEWIAVKVVVSKSIGTVGIRNATLQWGKFYRYTNKDDEISTEEVSSMNVQAGSPQWIASCGRENASSGTQGSFDCYDGNTKMGTFSWDDPWKSGATNTWSFTPASADYAGITSGGNATGTDIGEVTLTLGRFS
1PSR Chain:A ((16-49))
-------------------------------FHKYTRRDDKIDKPSLLTM-MKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIATDYHKQSHGAAPCSGGSQ-------------------
General information:
TITO was launched using:
RESULT:
Template:
1PSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1108 for 154 contacts (-7.2/contact) +
2D Compatibility (PS) -3627 + (NN) -686 + (LL) 2832
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -6239.0 ( -40.51 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1PSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSR-query.scw
PDB file :
Tito_Scwrl_1PSR.pdb
: