Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRTWIRNPLAIFTANGLDAAGGLVVEDGRIVELLGAGQQPAQPCASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLK---TLYPVWAR---LTPEKLELATKVALAELLLSGCTTAADHHYLFPGGL-EQAIDVQAGVVEELGMRAMLTRGSMSLGEKDGGLPPQQTVQEAETILADSERLIARYHQRGDGARVQIALAPCSPFSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQRLRYGAERITPELALG------WATRGSARLLGRSDIGELAPGKQADLALFKLDELRFSGSHDPLSALLLCA-ADRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG |
3LSC Chain:A ((44-427)) | --------------------------------------------VSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYQPLD-AGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHR---PADPNEPEKWLSARELLRMATRGSAECLGRPDLGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVENERPVLADLERIVANTTALIP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176260 for 3263 contacts (-54.0/contact) +
2D Compatibility (PS) -40295 + (NN) -24509 + (LL) 3864
1D Compatibility (HY) -20400 + (ID) 6750
Total energy: -264350.0 ( -81.01 by residue)
QMean score : 0.498
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