Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAADPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQALEKGKAQPFDGYIECP
4GHE Chain:A ((247-311))
------------------------------RHGV-SNAFYLFILDPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSWYTEASKVLDLDGNVQEIIERTDDSELEVTIG
General information:
TITO was launched using:
RESULT:
Template:
4GHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 19516 for 307 contacts (63.6/contact) +
2D Compatibility (PS) -6798 + (NN) -4043 + (LL) 2508
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 8033.0 ( 26.17 by residue)
QMean score : 0.137
(partial model without unconserved sides chains):
PDB file :
Tito_4GHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GHE-query.scw
PDB file :
Tito_Scwrl_4GHE.pdb
: