Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYALLSLLATGTLLAQGAWAEDPEVLFKNKGCVACHAIDTKMVGPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLSQK
1CCH Chain:A ((1-82))
----------------------QDGEALFKSKPCAACHSVDTKMVGPALKEVAAKNAGVEGAADTLALHIKNGSQGVWGPIPMPPNPVTEEEAKILAEWVLSLK
General information:
TITO was launched using:
RESULT:
Template:
1CCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20166 for 549 contacts (-36.7/contact) +
2D Compatibility (PS) -9212 + (NN) -10960 + (LL) 2008
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -47930.0 ( -87.30 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_1CCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CCH-query.scw
PDB file :
Tito_Scwrl_1CCH.pdb
: