Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
4RHN Chain:A ((5-115))
-DTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
4RHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93084 for 771 contacts (-120.7/contact) +
2D Compatibility (PS) -12341 + (NN) -9472 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -128639.0 ( -166.85 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4RHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHN-query.scw
PDB file :
Tito_Scwrl_4RHN.pdb
: