Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADETELKRLYWHSRRGMLELDVLLVPFVQEVYPGLDAEDQARFRKLLECEDQDMFGWFMQRGEPEDADLRRMVRMILDRVQPD
3K8L Chain:A ((359-418))
--------------------VDGLRLDAVKHIYHSETSEENPRFLKMFY---EDMNAYYKQKGHTDDFYMIGEVLSEYDKVAPY
General information:
TITO was launched using:
RESULT:
Template:
3K8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13371 for 327 contacts (-40.9/contact) +
2D Compatibility (PS) -6250 + (NN) -2361 + (LL) 1916
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -23716.0 ( -72.53 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_3K8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K8L-query.scw
PDB file :
Tito_Scwrl_3K8L.pdb
: