Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGG-HGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
2Z98 Chain:A ((1-179))
-SKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIP-VLDGELVGAL------LTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYT-ENGP---EGLVTGKKAIVITSRGGIHKDGP------TDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA-
General information:
TITO was launched using:
RESULT:
Template:
2Z98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105755 for 1302 contacts (-81.2/contact) +
2D Compatibility (PS) -19252 + (NN) -12173 + (LL) 764
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -154716.0 ( -118.83 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2Z98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z98-query.scw
PDB file :
Tito_Scwrl_2Z98.pdb
: