Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQA-----GGQLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTL----RGDNGTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGF--FYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLK-TRDGGSEEIAVDGMFVAIGHTPNTSLFEGQLALKD-GYLVVNGGREGNATATNVPGVFAAGDVADHVYRQAITSAGAGCMAALDVERYLDSL |
| 3D8X Chain:A ((12-325)) | --------KVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKN---EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPG----SSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234078 for 2602 contacts (-90.0/contact) +
2D Compatibility (PS) -32819 + (NN) -10349 + (LL) 900
1D Compatibility (HY) -24800 + (ID) 7550
Total energy: -308696.0 ( -118.64 by residue)
QMean score : 0.535
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