Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGPTDTSTQPQGFSMTRLRLIGSAVLLSLSSMAMADSASQAEQFLKLVHADK-LTVPVYAQVQQMLAQRFAQAKAPESKKAVLERYQAKANAELDRAIGWDKIKPELIKLYTTNFTESELKDLNAFYQSPLGKKVLEKMPRLTAESAQLTQAKLQGAVEPVNKLMADMDKELGVAAPAQKKK |
2WUG Chain:A ((158-226)) | -----------------------------LSKFSVAPTRENLEAFLRVMVYDKNLITP------ELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 816 for 366 contacts (2.2/contact) +
2D Compatibility (PS) -7344 + (NN) -3984 + (LL) 3416
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -12596.0 ( -34.42 by residue)
QMean score : 0.454
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