Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLILTRRVGE--TLMVGDD--------------VTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH
4KRW Chain:A ((11-73))
FLILSRREGEGITLSLKADYPAEELIRQLREGGIRILVTDIIGNQARVGIEAPRGVLIVRDELK-------------
General information:
TITO was launched using:
RESULT:
Template:
4KRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19702 for 228 contacts (-86.4/contact) +
2D Compatibility (PS) -5429 + (NN) -1963 + (LL) 796
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -31748.0 ( -139.25 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_4KRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KRW-query.scw
PDB file :
Tito_Scwrl_4KRW.pdb
: