Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGVFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNL--------------TLLPTQKPVPYAEYRAAIIEAGIRVVETA-------------------------GNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPG-------EDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQV--YQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLAGV |
4Q4K Chain:A ((4-350)) | ------RFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSI-AITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPL-FAEFGA---EPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTAL---TVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPA-AELLRTLVEELRG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124030 for 2567 contacts (-48.3/contact) +
2D Compatibility (PS) -32025 + (NN) -11997 + (LL) 2736
1D Compatibility (HY) -16000 + (ID) 5350
Total energy: -186666.0 ( -72.72 by residue)
QMean score : 0.447
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