Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLE-FKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
1MZ8 Chain:A ((3-87))
LKNSISDYTEAEFVQLLKEI---EKENVAATDDVLDVLLEHFVKITEHPDGTDLIYYPSDNRDDSPEGIVKEIKEWRAANGKPGFKQG
General information:
TITO was launched using:
RESULT:
Template:
1MZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3905 for 523 contacts (-7.5/contact) +
2D Compatibility (PS) -9183 + (NN) -9176 + (LL) 64
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -33250.0 ( -63.58 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_1MZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZ8-query.scw
PDB file :
Tito_Scwrl_1MZ8.pdb
: